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This table contains counts and statistics that are designed to give a sense of the rate at which the NMPDR is improving. Columns will be added on a monthly basis.

Counts and Statistics Dec 2007 Jan 2008 Feb 2008 Mar 2008 Apr 2008 May 2008 June 2008 July 2008 Aug 2008 Sep 2008 Oct 2008
RAST Statistics
Total number of RAST? Jobs from External Sources 435 538 606 702 787 960 1040 1207 1251 1540 1644
Total number of Metagenome RAST? Jobs from External Sources 202 440 481 572 675 733 887 978 982 1115 1363
Total number of Users 238 286 333 733 767 806 910 951 924 1066 1179
Total number of Organizations 136 155 139 149 157 168 174 179 179 189 236
Annotation Clearinghouse Statistics
Total number of expert assertions 10,407 38,156 46,830 48,940 57,213 68,266 68,883 68,883 230,436 230,436 230,436
Total number of FunctionalRoles covered by expert assertions 234 513 879 896 1,247 1,843 4,866 4,866 3,933 3,933 3,933
Genome Statistics
Total number of features with significant functional coupling? 766,693 766,693 766,693 772,736 772,736 772,736 772,736 927,524 927,524 927,524 927,524
Total number of pegs connected to FigFams 1,140,115 1,160,531 1,160,531 1,160,531 1,160,531 1,160,531 1,160,531 1,177,812 1,177,812 1,177,812 1,177,812
Total number of subsystem-based FigFams 10,132 15,976 15,976 15,976 15,976 15,976 15,976 15,976 21,008 21,008 21,008
Total Outbound Links to Major Bioinformatics Sites
UniProt Universal Protein Resource 4,323,239 4,323,239 3,381,399 3,391,353 3,402,478 3,412,823 3,412,823 6,010,749 6,010,749 6,413,869 6,932,724
J Craig Venter Institute (JCVI/TIGR) 986,035 986,035 1,612,242 2,559,565 2,559,565 2,559,565 2,559,565 2,559,565 266,298 266,298 266,298
Kyoto Encyclopedia of Genes and Genomes (KEGG) 2,223,026 2,223,026 2,542,650 2,793,416 2,804,615 2,880,214 2,880,214 2,880,214 3,349,417 3,349,417 3,959,205
Integrated Microbial Genomes System (IMG) 2,588,148 2,588,148 3,081,851 3,510,528 3,510,528 3,510,528 3,510,528 3,829,711 3,829,711 4,760,179 4,760,179
National Center for Biotechnology Information (NCBI) 5,428,792 5,428,792 9,355,848 10,094,694 10,466,301 11,233,722 11,233,722 14,233,596 14,233,229 15,209,870 15,209,870
Education Statistics
Total number of college courses using NMPDR or SEED 7 7 8 10 15 15 15 15 15 15 15
Total number of tutorial attendees 100 100 100 120 140 140 140 140 140 140 140
Topic revision: r11 - 13 Nov 2008 - 17:41:39 - BruceParrello
 
NMPDR is a collaboration among researchers from the Computation Institute of the University of Chicago, the Fellowship for Interpretation of Genomes (FIG), Argonne National Laboratory, and the National Center for Supercomputing Applications (NCSA) at the University of Illinois. NMPDR is funded by the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Contract HHSN266200400042C. Banner images are copyright © Dennis Kunkel.