This table contains counts and statistics that are designed to give a sense of the rate at which the NMPDR is improving. Columns will be added on a monthly basis.
| Counts and Statistics | Feb 2009 | Mar 2009 | Apr 2009 |
|---|---|---|---|
| Publications | 130 | 135 | 135 |
| Genomes | 748 | 801 | 801 |
| Features | 3,019,162 | 3,257,053 | 3,257,100 |
| Base Pairs | 25,171,364,609 | 25,407,910,157 | 25,407,910,157 |
| DB XREFS | 9,103,701 | 8,119,099 | 9,084,466 |
| FIGfam coverage | 1,097,681 | 1,302,831 | 1,338,895 |
| Subsystems | 632 | 616 | 616 |
| Registered Users | 1,598 | 1,728 | 1,815 |
| RAST Jobs | 4,011 | 4,483 | 4,813 |
| MG-RAST Jobs | 2,149 | 3,077 | 3,322 |
- Publications are NMPDR-related journal papers, including papers about the NMPDR, papers that cite the NMPDR, and papers using NMPDR technology.
- Genomes is the total number of genomes, including both core organisms and supporting organisms.
- Features is the total number of protein encoding genes and other coding sequences.
- Base Pairs is the total number of base pairs in all the genomes.
- DB XREFS are curated cross-references to features in other databases.
- FIGfam coverage is the number of features in FIGfams.
- Subsystems are the metabolic pathway sets used to curate annotations.
- Registered Users is the total number of registered users for the RAST and MG-RAST servers.
- RAST Jobs is the total number of jobs to date run through the RAST server.
- MG-RAST Jobs is the total number of jobs to date run through the MG-RAST server.
Topic revision: r19 - 01 May 2009 - 20:20:05 - Bruce Parrello
Notice to NMPDR Users - The NMPDR BRC contract has ended and bacterial data from NMPDR has been transferred to PATRIC (http://www.patricbrc.org), a new consolidated BRC for all NIAID category A-C priority pathogenic bacteria. NMPDR was a collaboration among researchers from the Computation Institute of the University of Chicago, the Fellowship for Interpretation of Genomes (FIG), Argonne National Laboratory, and the National Center for Supercomputing Applications (NCSA) at the University of Illinois. NMPDR is funded by the National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, under Contract HHSN266200400042C. Banner images are copyright © Dennis Kunkel.