http://www.nmpdr.org/FIG/wiki/view.cgi/Main The web for users, groups and offices. TWiki is an Enterprise Collaboration Platform. en-us Copyright 2008 by contributing authors TWiki Administrator [admin@figresearch.com] The contributing authors of NMPDR NMPDR http://www.nmpdr.org/FIG/wiki/view.cgi/Main http://www.nmpdr.org/FIG/wiki/pub/logos/nmpdrlogo.png http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Publications Publications Describing our tools 1. The metagenomics RAST server a public resource for the automatic phylogenetic and functional analysis of metagenomes. ... (last changed by LeslieMcNeil) 2008-11-20T16:33:14Z lmcneil http://www.nmpdr.org/FIG/wiki/view.cgi/Main/SeedEnvironment The SEED The SEED is the foundation of the NMPDR project. The public SEED at the University of Chicago can be used to edit the functional annotations of genes or to ... (last changed by LeslieMcNeil) 2008-11-13T22:53:46Z lmcneil http://www.nmpdr.org/FIG/wiki/view.cgi/Main/CountsAndStatistics This table contains counts and statistics that are designed to give a sense of the rate at which the NMPDR is improving. Columns will be added on a monthly basis. ... (last changed by BruceParrello) 2008-11-13T17:41:39Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/TWikiPreferences Site level preferences are located in .TWikiPreferences , however this .TWikiPreferences prefs topic has override priority and should be used for local customisations ... (last changed by BruceParrello) 2008-10-17T18:37:30Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/WebLeftBar Navigate Home Search NMPDR Organisms Genome Viewer Drug, Antitoxin, Vaccine Targets Essential Genes NMPDR Downloads Debug Console Code Search Developer ... (last changed by BruceParrello) 2008-10-17T05:12:24Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/OctoberEnhancements Updates in mid October Several minor changes have been made to the NMPDR as of the October 16 update. We have a new article with tips on how to search for genes ... (last changed by BruceParrello) 2008-10-17T04:57:12Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/ResearchCentral input.wide { width: 370px; } input.box { width: 200px; } select.box { width: 155px; } input.std { width: 65px; text align: center; } function setTargets(myTarget ... (last changed by BruceParrello) 2008-10-17T04:38:24Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/OtherServices External Services The NMPDR includes the following additional web sites. Rapid Annotation using Subsystem Technology (RAST) RAST (Rapid Annotation using Subsystem ... (last changed by BruceParrello) 2008-10-08T20:01:14Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/NmpdrVersion Version of October 8, 2008 Includes 45 archaeal, 660 bacterial, and 29 eukaryal genomes.612 active subsystems, 809925 new annotations, 384028 new features. (last changed by BruceParrello) 2008-10-07T14:18:34Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/ContactUs Contact NMPDR Postal mailing address: The Computation Institute 5640 S. Ellis Avenue Suite 405 Chicago IL 60637 United States of America Phone: (773) 834 ... (last changed by BruceParrello) 2008-10-06T15:50:21Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/Campylobacter Taxonomy: Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter Campylobacter search Read about Campylobacter: Campylobacter ... (last changed by BruceParrello) 2008-10-06T14:41:09Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/BruceParrello Bruce Parrello has been working with Ross Overbeek on and off for over thirty years. He did his dissertation on the use of normal forms for symbolic algebra manipulation ... (last changed by BruceParrello) 2008-10-01T07:58:30Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/VibrioStats Strain annotated in NMPDR Genome size, bp (PEGs) Named genes in subsystems Named genes not in subsystems Hypothetical genes in subsystems ... (last changed by BruceParrello) 2008-09-19T01:20:15Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/UreaplasmaStats Strain annotated in NMPDR Genome size, bp (PEGs) Named genes in subsystems Named genes not in subsystems Hypothetical genes in subsystems ... (last changed by BruceParrello) 2008-09-19T01:19:21Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/TreponemaStats Strain annotated in NMPDR Genome size, bp (PEGs) Named genes in subsystems Named genes not in subsystems Hypothetical genes in subsystems ... (last changed by BruceParrello) 2008-09-19T01:18:02Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/Main/StreptococcusStats Strain annotated in NMPDR Serotype Genome size, bp (PEGs) Named genes in subsystems Named genes not in subsystems Hypothetical genes in ... (last changed by BruceParrello) 2008-09-19T01:17:18Z parrello