http://www.nmpdr.org/FIG/wiki/view.cgi/SOP The SOP web of TWiki. TWiki is a Web-Based Collaboration Platform for the Enterprise. en-us Copyright 2009 by contributing authors TWiki Administrator [admin@figresearch.com] The contributing authors of NMPDR NMPDR http://www.nmpdr.org/FIG/wiki/view.cgi/SOP http://www.nmpdr.org/FIG/wiki/pub/logos/nmpdrlogo.png http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/DiagramPages var stuff ""; function GetDiagramData() { return stuff; } SOP: NMPDR Diagram Pages The NmpdrWebsite contains a diagramming engine that converts an ... (last changed by BruceParrello) 2008-11-28T17:26:33Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/NmpdrLightweightCodeUpdate SOP: A lightweight code update brings the code and wiki up to date on the NmpdrWebsite without modifying the data. It is used whenever an update from the development ... (last changed by BruceParrello) 2008-10-15T11:28:13Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/SimpleTests SOP: This page provides links and forms that can be used to perform simple tests of the NMPDR. These are useful as a basic sanity check of the operation of each new ... (last changed by BruceParrello) 2008-10-14T20:32:35Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/UpdatingFigFams SOP: are used by the NMPDR to group proteins with the same . The FigFams are updated periodically to reflect new genome annotations and uploaded to the NMPDR FTP ... (last changed by BruceParrello) 2008-10-12T03:09:59Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/BuildingANewDevelopmentNmpdr SOP: This procedure describes how to create a new version of the NMPDR on the devlopment server. This is the first step in updating the production NMPDR. A new instance ... (last changed by BruceParrello) 2008-09-24T01:14:13Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/StagingANewNmpdr SOP: Before a new NMPDR is put into production, it must be staged on the production server. This creates a new instance of the NMPDR in its target environment so ... (last changed by BruceParrello) 2008-09-13T14:13:31Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/KeggMapUpdate SOP: Visual KEGG maps are displayed in several pages. The live copy of the maps is stored in a shared file system in the development network. This procedure updates ... (last changed by BruceParrello) 2008-09-12T23:54:10Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/FindingADegeneratePeptideMotifInSelectedOrganisms SOP: This procedure explains how to use the NMPDR (BLAST or Scan in the ) to find a particular type of DNA sequence in one or more of our . First, select the BLAST ... (last changed by BruceParrello) 2008-08-18T15:31:24Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/FindingGenesThatAreImportantInSpecifiedTypesOfPathogens SOP: This procedure explains how to use the NMPDR page (SignatureGenesTool) to compare and contrast whole with the goal of defining what certain types of pathogens ... (last changed by BruceParrello) 2008-08-18T15:31:24Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/WebPreferences SOP Web Preferences The following settings are web preferences of the SOP web. These preferences overwrite the site level preferences in . and , and ... (last changed by BruceParrello) 2008-07-10T00:38:28Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/NmpdrWikiRefresh SOP: The main NMPDR Wiki is currently located at http:///next/. It is sometimes useful to have a private copy of the Wiki for testing purposes. This procedure allows ... (last changed by BruceParrello) 2008-06-02T20:22:36Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/SOP202 (last changed by BruceParrello) 2008-05-29T04:21:02Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/FindingGenesThatMayBeCharacteristicOfAPhenotype SOP: This procedure explains how to use the NMPDR page (SignatureGenesTool) to compare and contrast whole with the goal of defining a phenotype. For example ... (last changed by BruceParrello) 2008-05-23T02:55:20Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/SopForm Name Type Size Values Tooltip message Attributes Number text 3 3 digit ID number for this procedure M Audience select 1 ... (last changed by BruceParrello) 2008-05-21T14:37:41Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/SOP101 (last changed by BruceParrello) 2008-04-29T21:50:31Z parrello http://www.nmpdr.org/FIG/wiki/view.cgi/SOP/SOP010 (last changed by BruceParrello) 2008-04-29T20:17:39Z parrello